Here is a list of all modules with brief descriptions:

Mm_assign_variables
Mm_boundary_common	The purpose of the module is to apply noncharacteristic and processor boundary conditions
Mm_boundary_conditions	This module contains
Mm_check_ib_patches	This module contains subroutines that read, and check consistency of, the user provided inputs and data
Mm_check_patches	This module contains subroutines that read, and check consistency of, the user provided inputs and data
Mm_checker	The purpose of the module is to check for compatible input files
Mm_checker_common	The purpose of the module is to check for compatible input files for. inputs common to pre-processing, post-processing and simulation
Mm_chemistry
Mm_compile_specific	This module contains subroutines that are compiler specific
Mm_compute_levelset	This module is used to handle all operations related to immersed boundary methods (IBMs)
Mm_constants
Mm_data_output	This module takes care of writing the grid and initial condition data files into the "0" time-step directory located in the folder associated with the rank of the local processor, which is a sub- directory of the case folder specified by the user in the input file pre_process.inp
Mm_delay_file_access
Mm_derived_types	This file contains the definitions of all of the custom-defined types used in the pre-process code
Mm_finite_differences
Mm_global_parameters	This module contains all of the parameters characterizing the computational domain, simulation algorithm, initial condition and the stiffened equation of state
Mm_grid	This module takes care of creating the rectilinear grid on which the data for the initial condition will be laid out and on which the simulation will eventually be computed. The grid may either be uniform or non-uniform. Non-uniform grids are generated using the hyperbolic tangent function, see Johnsen (2007) for details. Alternatively to synthesizing a new grid, the user may select to read in a preexisting one. This is carried out through the module m_start_up.f90. In such a case, the responsibility of this module becomes only to allocate/deallocate the necessary grid variables for the cell-centers and cell-boundaries locations
Mm_helper
Mm_helper_basic
Mm_ib_patches	Allocate memory and read initial condition data for IC extrusion
Mm_icpp_patches	Allocate memory and read initial condition data for IC extrusion
Mm_initial_condition	This module provides a platform that is analogous to constructive solid geometry techniques and in this way allows for the creation of a wide variety of initial conditions. Several 1D, 2D and 3D fundamental geometries are included that may further be combined into more complex shapes. This is achieved by carefully setting up the order in which the patches are laid out in the domain and specifying the priority that each patch has over the preceding ones. The resulting shapes may be identified both by the values of their primitive variables and the associated patch identities. Note that the user may choose to read in and modify a preexisting initial condition. The module m_start_up.f90 is responsible for reading in the relevant data files
Mm_model
Mm_mpi_common	The module serves as a proxy to the parameters and subroutines available in the MPI implementation's MPI module. Specifically, the purpose of the proxy is to harness basic MPI commands into more complicated procedures as to accomplish the communication goals for the simulation
Mm_mpi_proxy	This module serves as a proxy to the parameters and subroutines available in the MPI implementation's MPI module. Specifically, the role of the proxy is to harness basic MPI commands into more complex procedures as to achieve the required pre-processing communication goals
Mm_nvtx
Mm_perturbation	This module contains subroutines that compute perturbations to the initial mean flow fields
Mm_phase_change	Energies (6-eqn to 4-eqn) equilibrium through an infinitely fast (algebraic) procedure
Mm_precision_select	This file contains the definition of floating point used in MFC
Mm_simplex_noise
Mm_start_up	This module contains subroutines that read, and check consistency of, the user provided inputs, grid and data. This module also allocates and initializes the relevant variables sets up the mpi decomposition and initial condition procedures
Mm_variables_conversion	This module consists of subroutines used in the conversion of the conservative variables into the primitive ones and vice versa. In addition, the module also contains the subroutines used to obtain the mixture variables and the subroutines used to compute pressure